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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs72517076 chr11:96175523 CAT/C 0.000196 488 15.27 16.65 15.72 KM Plot
THCA rs72589162 chr3:127691272 ATG/A 0 484 16.37 14.93 6.03 KM Plot
THCA rs72617038 chr2:137306789 A/C 0.000105 477 15.48 16.95 7.8 KM Plot
THCA rs72627169 chr14:74678680 T/C 1.2E-6 475 16.67 14.63 9.47 KM Plot
THCA rs72670112 chr4:88171966 G/A 1.79E-6 486 16.13 15.33 9.73 KM Plot
THCA rs72670120 chr4:88185034 T/G 0.000122 485 15.97 16.4 12.93 KM Plot
THCA rs72676985 chr4:110994086 A/G 6.96E-5 479 15.87 17.13 16.25 KM Plot
THCA rs72677965 chr4:115650505 A/G 1.46E-6 485 15.65 16.23 9.9 KM Plot
THCA rs72679877 chr14:23199411 G/A 1.63E-6 488 15.2 17.13 21.67 KM Plot
THCA rs72679889 chr14:23214251 C/T 9.9E-7 487 15.17 17.07 21.67 KM Plot
THCA rs72679898 chr14:23231060 T/C 1.75E-9 490 15.3 17.03 19.02 KM Plot
THCA rs72681896 chr1:77589724 A/G 8.83E-5 489 15.78 15.9 16.67 KM Plot
THCA rs72690960 chr8:143813806 G/T 6.91E-7 483 15.63 18.43 33.97 KM Plot
THCA rs72698699 chr1:156894825 C/T 1.47E-7 473 16.97 14.7 12.67 KM Plot
THCA rs72715090 chr9:72006273 A/T 3.02E-11 487 15.83 17.13 8.83 KM Plot